WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

This table lists the enriched transcription factor targets (TFT), number of Entrez IDs in your user data set for the TFT, the corresponding Entrez IDs, and the statistics for the enriched TF.
The statistic column lists:
Finally, the number of user gene ids is linked to a table with information about the user ids, and the Entrez IDs are linked to Entrez Gene.

TFT #Gene EntrezGene Statistics
hsa_CCAWWNAAGG_V$SRF_Q4 6 10335 1465 72 4638 4629 6876 C=87;O=6;E=0.05;R=129.32;rawP=5.55e-12;adjP=3.72e-10
hsa_V$SRF_C 6 3779 10335 72 4638 4629 6876 C=209;O=6;E=0.11;R=53.83;rawP=1.14e-09;adjP=3.46e-08
hsa_V$SRF_Q4 6 3779 1465 72 4638 4629 6876 C=220;O=6;E=0.12;R=51.14;rawP=1.55e-09;adjP=3.46e-08
hsa_V$SRF_01 4 3779 10335 72 4629 C=50;O=4;E=0.03;R=150.01;rawP=1.39e-08;adjP=2.33e-07
hsa_V$SRF_Q5_01 5 1465 72 4638 4629 6876 C=218;O=5;E=0.12;R=43.01;rawP=9.85e-08;adjP=1.32e-06
hsa_V$SRF_Q6 5 3779 72 4638 4629 6876 C=239;O=5;E=0.13;R=39.23;rawP=1.55e-07;adjP=1.73e-06
hsa_V$TATA_C 4 25802 4638 4629 6876 C=279;O=4;E=0.15;R=26.88;rawP=1.38e-05;adjP=0.0001
hsa_CAGCTG_V$AP4_Q5 6 3779 10335 72 3778 4638 8912 C=1502;O=6;E=0.80;R=7.49;rawP=0.0001;adjP=0.0007
hsa_CTTTAAR_UNKNOWN 5 10335 72 387882 25802 6876 C=960;O=5;E=0.51;R=9.77;rawP=0.0001;adjP=0.0007
hsa_V$GATA1_01 3 4916 387882 25802 C=242;O=3;E=0.13;R=23.24;rawP=0.0003;adjP=0.0014


WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).